Last updated on 2025-07-05 05:50:32 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.18 | 243.84 | 254.02 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 392.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 180.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 162.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 226.00 | 246.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.038, elapsed: 1.949 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.014, system: 0.116, elapsed: 11.994 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.626, system: 0.174, elapsed: 4.233 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.288 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.009, system: 0.370, elapsed: 19.470 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.518, system: 0.037, elapsed: 2.330 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.075, system: 0.087, elapsed: 12.900 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.012, elapsed: 0.346 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.787, system: 0.166, elapsed: 6.555 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.295 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.285, system: 0.329, elapsed: 23.456 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.030, elapsed: 2.751 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.010, system: 0.082, elapsed: 15.758 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.746, system: 0.175, elapsed: 5.847 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.248 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.168, system: 0.225, elapsed: 1.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.445, system: 0.549, elapsed: 27.080 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.465, system: 0.029, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.071, elapsed: 23.219 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.436 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.890, system: 0.182, elapsed: 7.177 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.254 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.344, system: 0.453, elapsed: 15.366 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.667, system: 0.784, elapsed: 50.184 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/102s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.043, elapsed: 1.884 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.484, system: 0.053, elapsed: 8.746 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.207 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.395, system: 0.163, elapsed: 3.814 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.004, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.250, system: 0.293, elapsed: 15.401 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.032, elapsed: 2.108 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.083, system: 0.069, elapsed: 13.654 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.010, elapsed: 0.343 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.629, system: 0.165, elapsed: 6.908 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.249 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.128, system: 0.297, elapsed: 24.132 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.552, system: 0.031, elapsed: 2.310 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.007, system: 0.062, elapsed: 14.399 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.546, system: 0.166, elapsed: 5.258 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.212 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.079, system: 0.252, elapsed: 0.919 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.174, system: 0.549, elapsed: 24.292 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.470, system: 0.028, elapsed: 1.743 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.159, system: 0.074, elapsed: 11.982 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.233 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.679, system: 0.203, elapsed: 5.019 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.008, elapsed: 0.225 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.193, system: 0.569, elapsed: 12.641 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.492, system: 0.928, elapsed: 32.649 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64