| available_results | Extract final configurations into a data frame | 
| cluster_overlap | Create a table of module overlap for two clusterings | 
| fast_cor | Fast computation of correlation | 
| find_module_sizes | Determine module sizes | 
| get_avg_num_regulators | Get the average number of active regulators per module | 
| get_num_final_configs | Return the number of final configurations | 
| get_rand_indices | Compute Rand indices | 
| get_regulator_list | Return list of regulator genes | 
| get_target_gene_modules | Extract target gene modules for given penalization parameters | 
| kmeanspp | Perform the k-means++ algorithm | 
| plot_module_count_helper | Plot average silhouette scores and average predictive R^2 | 
| plot_regulator_network | Plotting the regulatory table from scregclust as a directed graph | 
| plot_silhouettes | Plot individual silhouette scores | 
| scregclust | Uncover gene modules and their regulatory programs from single-cell data | 
| scregclust_format | Package data before clustering |