| AIC.cauphyfit | Generic Methods for S3 class 'cauphyfit'. | 
| AIC.cauphylm | Generic Methods for S3 class 'cauphylm'. | 
| AIC.logLik.cauphyfit | Generic Methods for S3 class 'cauphyfit'. | 
| AIC.logLik.cauphylm | Generic Methods for S3 class 'cauphylm'. | 
| ancestral | Posterior density of a node | 
| ancestral.cauphyfit | Posterior density of a node | 
| ancestral.cauphylm | Posterior density of a node | 
| cauphylm | Phylogenetic Regression using a Cauchy Process | 
| coef.cauphyfit | Generic Methods for S3 class 'cauphyfit'. | 
| coef.cauphylm | Generic Methods for S3 class 'cauphylm'. | 
| compute_vcov | Compute Approximated Variance Covariance Matrix | 
| confint.cauphyfit | Generic Methods for S3 class 'cauphyfit'. | 
| confint.cauphylm | Generic Methods for S3 class 'cauphylm'. | 
| fitCauchy | Model fitting for a Cauchy Process | 
| hdi.ancestralCauchy | Highest (Posterior) Density Interval | 
| increment | Posterior density of an increment | 
| increment.cauphyfit | Posterior density of an increment | 
| increment.cauphylm | Posterior density of an increment | 
| lizards | Greater Antillean Anolis lizard dataset | 
| logDensityTipsCauchy | Log Density of a Cauchy Process | 
| logLik.cauphyfit | Generic Methods for S3 class 'cauphyfit'. | 
| logLik.cauphylm | Generic Methods for S3 class 'cauphylm'. | 
| plot.ancestralCauchy | Plot for class 'ancestralCauchy' | 
| plot.profile.cauphyfit | Plot for class 'profile.cauphyfit' | 
| plot_asr | Plot Ancestral States Reconstructions | 
| posteriorDensityAncestral | Posterior density of a node | 
| posteriorDensityIncrement | Posterior density of an increment | 
| predict.cauphylm | Generic Methods for S3 class 'cauphylm'. | 
| print.cauphyfit | Generic Methods for S3 class 'cauphyfit'. | 
| print.cauphylm | Generic Methods for S3 class 'cauphylm'. | 
| profile.cauphyfit | Method for Profiling 'cauphyfit' Objects | 
| rTraitCauchy | Cauchy Trait Simulation | 
| vcov.cauphyfit | Generic Methods for S3 class 'cauphyfit'. | 
| vcov.cauphylm | Generic Methods for S3 class 'cauphylm'. |