| MetaLandSim-package | Landscape And Range Expansion Simulation | 
| accept.calculate | Calculate acceptance rates in MCMC chains | 
| addpoints | Add a given number of patches to a landscape | 
| cabrera | Modified patch occupancy data of Cabrera vole | 
| calcmode | Function for mode estimation of a continuous variable | 
| cluster.graph | Delivers the number of patches per cluster | 
| cluster.id | Classify patches in clusters | 
| coda.create | Create files for use with R-package coda. | 
| combine.chains | Combines two chains into a single chain. | 
| components.graph | Number of components of a landscape | 
| convert.graph | Convert data frame to landscape | 
| create.parameter.df | Create parameter data frame | 
| edge.graph | Produce an edge (links) data frame | 
| expansion | Class 'expansion' | 
| extract.graph | Extract landscape from span.graph generated list | 
| ifm.missing.MCMC | Estimate the 'missing' design incidence function model | 
| ifm.naive.MCMC | Estimate the naive design incidence function model | 
| ifm.robust.MCMC | Estimate the robust design incidence function model | 
| import.shape | Import a shapefile | 
| iterate.graph | Simulate landscape series occupation | 
| landscape | Class 'landscape' | 
| landscape_change | Landscape loosing 5% of patches per time step | 
| list.stats | Returning information on a dynamic landscape list | 
| manage_expansion_sim | Simulate range expansion simulation | 
| manage_landscape_sim | Batch landscape simulation | 
| matrix.graph | Returning a matrix with information on connections between patches | 
| mc_df | Modified patch occupancy data of Cabrera vole as a data frame | 
| merge_order | Internal functions for the MetaLandSim package. | 
| MetaLandSim | Landscape And Range Expansion Simulation | 
| metapopulation | Class 'metapopulation' | 
| metrics.graph | Computes landscape connectivity metrics | 
| min_distance | Computes topological distance | 
| occ.landscape | Sample landscape with one simulated occupancy snapshot | 
| occ.landscape2 | Sample landscape with 10 simulated occupancy snapshots | 
| param1 | Sample parameter data frame number 1 | 
| param2 | Sample parameter data frame number 2 | 
| parameter.estimate | Estimate parameters | 
| plotL.graph | Plot one landscape of the list created by span.graph | 
| plot_expansion | Graphical display of the expansion simulations | 
| plot_graph | Graphical display of the landscape | 
| range_expansion | Computes a range expansion model | 
| range_raster | Probability of occupancy, dispersal model | 
| remove.species | Remove the species occupancy from the landscape | 
| removepoints | Remove a given number of patches from the landscape | 
| rg_exp | List with range.expansion output | 
| rland | Random landscape | 
| rland.graph | Creates random landscape graph | 
| sim.area | Vector of the areas for each site; here, 100 sites | 
| sim.det.20 | Array corresponding to nsites x nyears x nvisits | 
| sim.distance | Distance matrix between sampling sites (nsite x nsite). | 
| simulatedifm | Set of simulated data to use with the IFM parameter estimation functions. The data were generated using the code provided in "details". | 
| simulate_graph | Simulate species occupancy in one dynamic landscape | 
| span.graph | Simulate landscape dynamics over a number of time steps | 
| species.graph | Simulate landscape occupation | 
| spom | Stochastic Patch Occupancy Model | 
| summary_landscape | Summarize 'landscape' class objects | 
| summary_metapopulation | Summarize 'metapopulation' class objects | 
| z.sim | Occupancy data generated with perfect detection. | 
| z.sim.20 | Occupancy data generated with perfect detection with approximately 20% of data missing at random. | 
| z.sim.20.fa | Occupancy data containing false absences |