| add_cell_coloring | Add colouring to a set of cells. | 
| add_density_coloring | Color cells using a background density | 
| add_milestone_coloring | Add colouring to a set of milestones. | 
| dynplot | dynplot: Plotting Single-Cell Trajectories | 
| empty_plot | Create an empty plot for spacing | 
| example_bifurcating | An example bifurcating dataset | 
| example_disconnected | An example disconnected dataset | 
| example_linear | An example linear dataset | 
| example_tree | An example tree dataset | 
| get_milestone_palette_names | Get the names of valid color palettes | 
| linearise_cells | Prepare a trajectory for linearised visualisation. | 
| milestone_palette | Get the names of valid color palettes | 
| plot_default | Plot a trajectory as a graph | 
| plot_dendro | Plot a trajectory as a dendrogram | 
| plot_dimred | Plot a trajectory in a (given) dimensionality reduction | 
| plot_graph | Plot a trajectory as a graph | 
| plot_heatmap | Plot expression data along a trajectory | 
| plot_linearised_comparison | Compare two trajectories as a pseudotime scatterplot | 
| plot_onedim | Plot a trajectory as a one-dimensional set of connected segments | 
| plot_strip | Plot strip | 
| plot_topology | Plot the topology of a trajectory | 
| project_waypoints_coloured | Project the waypoints | 
| theme_clean | We like our plots clean | 
| theme_graph | We like our plots clean |